Assembled transcriptome
(post filter/trimming/decontamination) assembled and analyzed in Matsumoto and Miglietta (submitted, Sept 2020)
Transcriptome annotations
Transcriptome annotations in GFF format which includes sequence name, sequence length, BLASTx description, expectation value, number of hits, number of GO terms, GO terms and GO descriptions.
16S DNA Barcoding Data
- Various locations (Miglietta and Lessios, 2008)
- Bocas del Toro, Panama (Miglietta et al., 2018)
Raw RNA-Sequencing Data
- RNA-seq of pooled colonial polyps (single replicate) from Otranto, Italy
- RNA-seq of pooled newborn medusa (single replicate) from Otranto, Italy
- RNA-seq of individual colonial polyps (biological triplicate, individual polyps) from Bocas del Toro, Panama (Atlantic) (yet to be released)
- RNA-seq of individual medusae (biological triplicate, individual medusae) from Bocas del Toro, Panama (Atlantic) (yet to be released)
- RNA-seq of individual cysts (biological triplicate, individual cysts) from Bocas del Toro, Panama (Atlantic)
- RNA-seq of individual reversed polyps (biological triplicate, individual reversed polyps) from Bocas del Toro, Panama (Atlantic) (yet to be released)
Transcriptome assemblies (Fasta files)
- Colonial polyp transcriptome (Otranto, Italy)
- Newborn medusa transcriptome (Otranto, Italy)
- Cyst transcriptome (Bocas del Toro, Panama)
Transcriptome annotations (GFF files)
- Colonial polyp transcriptome (Otranto, Italy)
- Newborn medusa transcriptome (Otranto, Italy)
- Cyst transcriptome (Bocas del Toro, Panama)
Images by: D. Maggioni
